BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F05SP1|AL429600
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1377 1764 0.0
>3x_Contig1377
Length = 8397
Score = 1764 bits (889), Expect = 0.0
Identities = 900/903 (99%), Gaps = 1/903 (0%)
Strand = Plus / Plus
Query: 1 atcacattatcagatacaaatggagttgatgatactattaatccagggtctgccggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5223 atcacattatcagatacaaatggagttgatgatactattaatccagggtctgccggctct 5282
Query: 61 ttatcgatgccgacctcccatttgattatcatattacaaaagctatcctttcctacttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5283 ttatcgatgccgacctcccatttgattatcatattacaaaagctatcctttcctacttaa 5342
Query: 121 ctatatgagacaattgtatttctcattttactgcgaaattaggttggttacaaatctacg 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5343 ctatatgagacaattgt-tttctcattttactgcgaaattaggttggttacaaatctacg 5401
Query: 181 ctatacgttgctattaaaccactagcttatgtttgtaaaaataccctgtgtcaagggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5402 ctatacgttgctattaaaccactagcttatgtttgtaaaaataccctgtgtcaagggatg 5461
Query: 241 gacaacaggccaaaatctgacaagtaaacactttgtactggtgaatcttttattacacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5462 gacaacaggccaaaatctgacaagtaaacactttgtactggtgaatcttttattacacaa 5521
Query: 301 agtgtcgcctttcatttatgtcttggaaagcgtcacaagaaaatggaggaatgaaaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5522 agtgtcgcctttcatttatgtcttggaaagcgtcacaagaaaatggaggaatgaaaaaaa 5581
Query: 361 aaaaggcatacagtaaaacaaacgatgcttcgacgaattaaacatgcacttacaatcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5582 aaaaggcatacagtaaaacaaacgatgcttcgacgaattaaacatgcacttacaatcagc 5641
Query: 421 tttcagctttacattattatctgattgtctgatttttgtcgttgtttttgttctcattcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5642 tttcagctttacattattatctgattgtctgatttttgtcgttgtttttgttctcattcc 5701
Query: 481 gcctccgttgtaccagcattaaagcctttgaccgagcttacaccatttccattactttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5702 gcctccgttgtaccagcattaaagcctttgaccgagcttacaccatttccattactttac 5761
Query: 541 tagaataagcctttagagcttgaaaaattcatttttctatttttcagatttttgatcttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5762 tagaataagcctttagagcttgaaaaattcatttttctatttttcagatttttgatcttt 5821
Query: 601 tggcaaaaaagaatacyaacctcatcaatgcgactcacgtaaggctttgactcaggacaa 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5822 tggcaaaaaagaatactaacctcatcaatgcgactcacgtaaggctttgactcaggacaa 5881
Query: 661 gagcggagtgagcttactaactggcattgaacctcatttgtataattcgagtattggtaa 720
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5882 gagcggagtgagcttactaactggcattgaacctcatttgtataaatcgagtattggtaa 5941
Query: 721 caactagcctgtgttttgctctctgtctcaatctttcaccctacttacaatctgtggtcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5942 caactagcctgtgttttgctctctgtctcaatctttcaccctacttacaatctgtggtcc 6001
Query: 781 gatattctttatggaaaaaagcaactagacatgtctcaccataataattatgcattggct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6002 gatattctttatggaaaaaagcaactagacatgtctcaccataataattatgcattggct 6061
Query: 841 catacgttgaaccagatgaaaccccaacagttgagtaacaatgtgttcttcggacccttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6062 catacgttgaaccagatgaaaccccaacagttgagtaacaatgtgttcttcggacccttg 6121
Query: 901 aac 903
|||
Sbjct: 6122 aac 6124
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,119
Number of Sequences: 1807
Number of extensions: 12119
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)